Software/ Programmes
Filter by: MATLAB, Python, Julia, R, Java, C/C++, commandline, web app, standalone application [reset filter]Available software for the creation and application of RPs and their quantitative analysis facilitates the spread of their application (no claim to completeness):
RecPlot 1.0
by Krishna Nayak (1994)
creation of RPs and computing the correlation and Hausdorff dimensions, source code available, commandline based (unfortunately, not available anymore)
» https://web.archive.org/web/19970110180438/http://www.scri.fsu.edu/~nayak/recplot/Visual Recurrence Analysis 4.9
by Eugene Kononov (1996)
Creation of RPs and computing the RQA measures, only for MS Windows, graphical user interface.
» https://visual-recurrence-analysis.software.informer.com/RQA Software
by Charles Webber Jr. (1996)
Allows for the creation of RPs as well as CRPs and their quantification, only for DOS, commandline based.
» https://cwebber.sites.luc.edu/TISEAN 3.01
by Rainer Hegger, Holger Kantz and Thomas Schreiber (1997)
Many tools and methods from nonlinear time series analysis, regarding the recurrence based analysis only RPs can be created, free source code, binary executables for OSF, Linux and Windows, commandline based.
» https://www.mpipks-dresden.mpg.de/~tiseanRecurrencePlots
by Paul Bourke (1998)
Two C programmes (source code) for creation distance and recurrence plots as bitmap files (I could not create a running compilation from this code), commandline based.
» https://paulbourke.net/fractals/fracdim/CRP Toolbox for MATLAB
by Norbert Marwan (1998)
Allows for the creation of RPs, CRPs as well as JRPs, quantification analysis of RPs, CRPs and JRPs includes the new measures of complexity as LAM and TT, time scale alignment tool based on CRPs and further useful tools and methods of nonlinear time series analysis and data preparation are provided, platform independent (for Matlab), both usage of graphical user interface as well as commandline call is possible, a plugin is available enabeling the computation of RPs and RQA of long data series.
» https://tocsy.pik-potsdam.de/CRPtoolboxRecurrencePlots for Mathematica
by Max Keilbach (2001)
A simple package for Mathematica which can create and visualize recurrence plots (a brief example: recurrenceplot.nb, screenshot).
» https://web.archive.org/web/20020717005921/http://oek.cs.tu-berlin.de:80/~keilbach/recurrence.html (source code: RecurrencePlots.ma)RCPLOT
by Tom Wouters (2004)
A Java implementation of recurrence plots, source code available, should be implemented in own programmes (not stand-alone), not available anymore.
» https://web.archive.org/web/20041018084623/http://web.ulyssis.org/~aqua/Dataplore
by ixitos GmbH (2004)
Commercial software for data analysis which includes a function to compute a recurrence plot (only RPs due to Eckmann et al. (1987) are supported), available for Windows and some Unix.
» https://www.ixitos.com/produkte/dataplore/tseriesChaos: Analysis of Nonlinear Time Series
by Antonio Fabio Di Narzo (2005)
Routines for the analysis of nonlinear time series, including the creation of a simple recurrence plot. This work was mainly based on routines as implemented in TISEAN.
» https://cran.r-project.org/package=tseriesChaosBios Analyzer
by Lazar Kovacevic (2005)
Python based nonlinear data analysis software, allows the creation of RPs and isometric RPs, graphical user interface.
» https://www.inverudio.com/programs/BiosAnalyzer/BiosAnalyzer.phpCommandline Recurrence Plots
by Norbert Marwan (2005)
Allows for the creation of RPs and their quantification analysis for really long data series, commandline based, currently for Unix/ Linux and Win2k.
» https://tocsy.pik-potsdam.de/commandline-rp.phpfNonlinear: Nonlinear and Chaotic Time Series Modelling
by Diethelm Wuertz and many others, see the SOURCE file (2007)
R package with similar functionality as the TISEAN package.
» https://cran.r-project.org/web/packages/fNonlinear/index.htmlRecurrence plots online
by Norbert Marwan (2007)
Calculation of recurrence plots and recurrence quantification analysis in a web browser.
» http://www.recurrence-plot.tk/online/GenomDiff
by Claus Wimmer (2007)
A Java implementation of a dot matrix for Genome comparison.
» https://web.archive.org/web/20160314093101/https://sourceforge.net/projects/genomdiff/pyunicorn
by Jonathan Donges et al. (2008)
UNIfied COmplex Network and Recurrence aNalysis toolbox: a fully object-oriented Python package for the advanced analysis and modeling of complex networks and performing recurrence analysis, including recurrence networks.
» https://tocsy.pik-potsdam.de/pyunicorn.phpRHRV: Heart Rate Variability Analysis of ECG Data
by Leandro Rodriguez-Linares (2008)
A package for heart rate variability analysis for R, including the calculation of RQA measures.
» https://cran.r-project.org/web/packages/RHRV/index.htmlRQA X
by Andrew Keller (2008)
An implementation of the original RQA software by Ch. Webber Jr. for Mac OSX.
» software/rqax.dmg (source code: software/rqax.zip)nonlinearTseries
by Constantino Antonio Garcia Martinez (2013)
nonlinearTseries is an R package providing functions for nonlinear time series analysis. It contains functions for recurrence plot calculation and RQA.
» https://cran.r-project.org/web/packages/nonlinearTseriesKubios HRV
by Kubios (2013)
Professional HRV analysis software, including RP and RQA.
» https://www.kubios.com/RqaMatlab/ RqaPython
by BARLab (2013)
Simple MATLAB and Python functions to create RPs and perform RQA.
» https://barlab.psych.ubc.ca/research/#section-tabbed-7-tab-0Recurrence quantification analysis (RQA) for MATLAB
by Gaoxiang Ouyang (2014)
Simple MATLAB functions for calculating recurrence plots and recurrence quantification analysis.
» https://de.mathworks.com/matlabcentral/fileexchange/46765-recurrence-quantification-analysis-rqacrqa: Cross-Recurrence Quantification Analysis for Categorical and Continuous Time-Series
by Moreno I. Coco and Rick Dale (2014)
An R package for cross-recurrence quantification.
» https://cran.r-project.org/web/packages/crqa/rqaCI
by Stefan Schinkel (2014)
RQACI - routines to estimate confidence bounds of recurrence-based complexity measures.
» software/rqaci.zip and https://web.archive.org/web/20151101062843/http://people.physik.hu-berlin.de/~schinkel/rqaci.htmlrqaGUI
by Stefan Schinkel (2014)
A Python frontend for the Commandline Recurrence Plots software.
» software/rqaGUI.py and https://web.archive.org/web/20151101062843/http://people.physik.hu-berlin.de/~schinkel/rqagui.htmlRSA
by Peter beim Graben (2014)
MATLAB code to perform recurrence grammar and recurrence structure analysis (RSA).
» https://tocsy.pik-potsdam.de/rsa.php and https://tocsy.pik-potsdam.de/recgram.phphctsa: highly comparative time-series analysis
by Ben Fulcher (2015)
MATLAB package for time series classification using many time-series features, including recurrence time entropy.
» https://github.com/benfulcher/hctsa/PyRQA
by Tobias Rawald (2015)
Python package to perform recurrence quantification analysis (RQA) and to create recurrence plots in a massively parallel manner using the OpenCL framework.
» https://pypi.python.org/pypi/PyRQA/RecurrenceAnalysis.jl
by Helios De Rosario (2016)
Julia package for the exploration of chaos and nonlinear dynamics including recurrence plots and recurrence quantification analysis (RQA) and to create recurrence plots.
» https://github.com/heliosdrm/RecurrenceAnalysis.jlmdRQA
by Sebastian Wallot (2016)
Single function for MATLAB and R to calculate RP and RQA.
» https://github.com/Wallot/MdRQA/Tool box of recurrence plot and recurrence quantification analysis
by Hui Yang (2016)
A MATLAB toolbox for recurrence plot and recurrence quantification analysis.
» https://mathworks.com/matlabcentral/fileexchange/58246-tool-box-of-recurrence-plot-and-recurrence-quantification-analysisRQA HPC
by Tomas Martinovic (2017)
Highly scalable C code to calculate RP and RQA for cluster computers.
» https://code.it4i.cz/ADAS/RQA_HPCpyts
by Johann Faouzi (2017)
pyts is a Python package dedicated to time series classification. It provides a simple recurrence plot calculation for transforming time series into images (for use in classification).
» https://pyts.readthedocs.io/en/stable/index.htmlrecurrence-plot
by Dawid Laszuk (2017)
A Python function for creating recurrence plot.
» https://github.com/laszukdawid/recurrence-plotACYCLE: time-series analysis software for paleoclimate research and education
by Mingsong Li (2018)
A MATLAB toolbox consisting of many time series analysis tools, including a simple recurrence plot creation. It is also available as a standalone application.
» https://acycle.org/casnet: An R toolbox for studying Complex Adaptive Systems and NETworks
by Fred Hasselmann (2018)
An R package with a collection of analytic tools for studying signals, including recurrence quantification analysis.
» https://github.com/FredHasselman/casnetRQAToolbox
by Mike Richardson (2018)
MATLAB scripts for RQA.
» https://github.com/xkiwilabs/MATLAB-Toolboxes/RQA and CRQA GUI-Application
by Mike Richardson (2018)
MATLAB scripts for a GUI-based RQA.
» https://github.com/xkiwilabs/RQA-and-CRQA-GUI-Application/RQA for Mathematica
by Flip Phillips (2019)
A set Mathematica tools for RQA – Recurrence quantification analysis.
» https://github.com/flipphillips/RQAResources for recurrence quantification analysis
by Alexandra Paxton (2019)
Tools and tutorials to help with RQA and CRQA in R.
» https://github.com/a-paxton/crqa-tools-and-moreVisualisation Cross Recurrence Quantification Analysis
by Leshao Zhang (2019)
Recurrence plots with the Processing language.
» https://github.com/Leshao-Zhang/Visualisation-Cross-Recurrence-Quantification-AnalysisRR APET HRV analysis software
by Meghan McConnell (2019)
Package with Python functions to study heart rate variability, including RP and RQA.
» https://gitlab.com/MegMcC/rr-apet-hrv-analysis-softwarerandseqR
by Fred Hasselman (2019)
An R package for calculating randomness and redundancies in sequences of symbols. It includes categorical RQA.
» https://github.com/FredHasselman/randseqRBorder effect corrections for RQA
by Hauke Kraemer (2019)
MATLAB code to calculate RPs and perform RQA with various border corrections schemes (according to H. Kraemer and N. Marwan, Phys. Lett. A, 2019).
» https://zenodo.org/record/3384892Recurrence Plot & Quantification
by Hauke Kraemer and Norbert Marwan (2019)
Simple MATLAB functions for calculating recurrence plots and recurrence quantification.
» https://github.com/pucicu/rp/recurrence_python
by Barbara Reis (2020)
This scientific software written in Python 3 computes Recurrence Plot (RP), Cross Recurrence Plot (CRP), Joint Recurrence Plot (JRP) and Recurrence Quantification Analysis.
» https://github.com/bmfreis/recurrence_pythonrecurrence_cpp
by Barbara Reis (2020)
This scientific software written in C++ computes Recurrence Plot (RP), Cross Recurrence Plot (CRP), Joint Recurrence Plot (JRP) and Recurrence Quantification Analysis on commandline of Linux systems.
» https://github.com/bmfreis/recurrence_cppPattern Transition Detection Algorithm (PTDA)
by Kathrin Viol (2020)
MATLAB package for change point analysis including recurrence plots.
» https://de.mathworks.com/matlabcentral/fileexchange/80380-pattern-transition-detection-algorithm-ptdaCEPS: Analysis of Complexity and Entropy in Physiological Signals
by Deepak Panday (2020)
MATLAB GUI with wrapper to external software packages that include functions for calculating recurrence plots and recurrence quantification
» https://bitbucket.org/deepak_panday/pipeline/multiSyncPy
by Computational Sensemaking Lab (2021)
A Python package for quantifying multivariate synchrony, including simple RQA measures.
» https://github.com/cslab-hub/multiSyncPyRECLAC Python
by Tobias Braun (2021)
The RECLAC Python package provides functions to compute recurrence lacunarity. It also offers a basic implementation of traditional recurrence quantification measures and computation of box-counting dimensions.
» https://github.com/ToBraun/RECLACNoLiTiA: An Open-Source Toolbox for Non-linear Time Series Analysis
by Clinical Systems Neuroscience, University Hospital Giessen & Marburg (2021)
MATLAB Toolbox including methods for dynamical systems theory, recurrence qunatification analysis, and information theory.
» https://nolitia.com/RQA demos
by Julian Zubek (2022)
Simple implementation of recurrence quantification analysis (RQA) in a web browser.
» https://hill.psych.uw.edu.pl/rqa_js/ComsystanJ: Complex Systems Analysis for ImageJ
by Helmut Ahammer (2023)
Collection of Fiji/ImageJ2 plugins to compute the complexity, fractal dimension, entropy, recurrence quantification analysis and other nonlinear measures of images and signals.
» https://comsystan.github.io/comsystanj/
Comparison of the calculation speeds and between some of the software can be found in:
- https://github.com/pucicu/RP_Speed_Test
- J. Belaire-Franch, D. Contreras: Recurrence Plots in Nonlinear Time Series Analysis: Free Software, Journal of Statistical Software 7(9) (2002).
Recurrence Plots Online
Try out online, what recurrence plots are:
Recurrence Plots Online
Mathematica Demonstrations Project:
Recurrence-Based Representations of the Logistic Map
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